DNA Binding Site
| Accessions: | GTCATTAA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Drosophila melanogaster, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GTCATTAA |
| Type: | Heterodimer |
| Binding TFs: | UP00263A (Homeobox domain) UP00235A (Homeobox domain, Protein of unknown function (DUF3528)) UP00063A / UP00391A (Homeobox domain) UP00113A (Homeobox domain) UP00117A (Homeobox domain) UP00121A (Homeobox domain) UP00124A (Homeobox domain) UP00137A (Homeobox domain) UP00140A (Homeobox domain) UP00144A (Homeobox domain) UP00168A (Homeobox domain) UP00174A (Homeobox domain) UP00182A (Homeobox domain) UP00189A (Homeobox domain) UP00196A (Homeobox domain) UP00200A (Homeobox domain) UP00206A (Homeobox domain) UP00207A (Homeobox domain) UP00213A (Homeobox domain) UP00214A (Homeobox domain) UP00215A (Homeobox domain) UP00217A (Homeobox domain) UP00225A (Homeobox domain) UP00233A (Homeobox domain) UP00238A (Homeobox domain) UP00241A (Homeobox domain) UP00242A (Homeobox domain) UP00245A (Homeobox domain) UP00246A (Homeobox domain) UP00252A (Homeobox domain) UP00259A (Homeobox domain) UP00260A (Homeobox domain) UP00264A (Homeobox domain) UP00164A (Homeobox domain) UP00503A (Homeobox domain) UP00512A (Homeobox domain) UP00595A (Homeobox domain) UP00595B (Homeobox domain) UP00596A (Homeobox domain) UP00596B (Homeobox domain) UP00596C (Homeobox domain) UP00623A (Homeobox domain) UP00623B (Homeobox domain) |
| Binding Motifs: | UP00259A_1 wwtksgTAATTACsdy UP00200A_2 rrtwATTAATKAykyc UP00063A_1 tkgagbTAATTAry UP00113A_1 CgmrTTAATTAAywawm UP00117A_1 / UP00140A_2 ywarGTCGTAAAawyht UP00121A_1 / UP00140A_1 mrkgyAATAAAAtwwww UP00124A_1 marsTAATTAgywcAt UP00137A_1 wravcTMATKAgykrrw UP00140A_5 wraryTAATTArytgkw UP00144A_1 cgmrTTAATTAAtwahy UP00164A_1 sgmrtTAATTAatwagc UP00168A_1 taadTAATTAATrgctw UP00174A_1 amggTAATTAscymAd UP00140A_3 ywavGTCGTAAAatywt UP00140A_4 mwwyyAATAAAAhymh UP00182A_1 amgkTAATTACcymak UP00264A_3 wwwbCTCGTAAAawtt UP00189A_1 amgkTAATTAscwmar UP00196A_1 grttrtTAATTAackbg UP00200A_1 gmwwATTAATTAmyybg UP00206A_1 stakTAATTAmtkshr UP00207A_1 rrrgymATWAAAwycr UP00213A_1 rcggycATwAAAwtadw UP00214A_1 amgkTAATTAschmat UP00215A_1 asgtTAATTAvcyyag UP00217A_1 / UP00264A_1 dmgGyMATWAAAtkmw UP00225A_1 cmaTAATTrATTAym UP00233A_1 rvkgTAATTAsmycAg UP00235A_1 yaarGTCGTAAAayrk UP00238A_1 gawwwTTAATKAmtkyk UP00241A_1 ytgrgkTAATTAmcst UP00242A_1 twkrrgTAATTAhykt UP00245A_1 twarGTCRTAAAaysk UP00246A_1 / UP00264A_2 waarGTCRTAAAayrk UP00252A_1 cgmrtTAATTAatwayt UP00260A_1 yrarkTAATTAmtwamw UP00263A_1 wsykGyAATTAAtarw UP00264A_4 ctrarcTAATTAmyky UP00391A_1 tygmrbTAATTAry UP00063A_2 aarawCbATTArsr UP00164A_2 kkmkTAATTAmkggmm UP00503A_1 ggrarrgGymATWAAattyhba UP00512A_1 aawraarGGTAATTAmydkwkw UP00595A_1 TdanrbbrTAATTAytrywawww UP00595A_2 ttmyywrrTAATTAyyawtwwA UP00595B_1 wamktwTAATywATTAtartttt UP00595B_2 ttmyyargTAATTAcydwtwwA UP00596A_1 rAawwaATAATmATTAkycwwwr UP00596B_1 kkmcgcgTTAATTAAkmmtcgr UP00596B_2 twmmwasyTAATTArtwawadk UP00596C_1 kkcsrmgtTAATTAakmatcgg UP00596C_2 wtmtawGkTAATTAhChhAdwaa UP00623A_1 tyatcggsTAATTAscycAktmr UP00623B_1 whmtrkGsTAATTAsCccAtwaa UP00623B_2 whatskGyTAATTAsCycAdtar |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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