DNA Binding Site
| Accessions: | ATTTCCGG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATTTCCGG |
| Type: | Heterodimer |
| Binding TFs: | UP00310A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00475A (Fungal Zn(2)-Cys(6) binuclear cluster domain, Fungal specific transcription factor domain ) UP00013A / UP00408A (Ets-domain) UP00049A (SAND domain) UP00281A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00290A (Fungal Zn(2)-Cys(6) binuclear cluster domain, Fungal specific transcription factor domain ) UP00295A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00305A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00323A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00404A (Ets-domain) UP00409A (Ets-domain) UP00410A (Ets-domain) UP00412A (Ets-domain) UP00413A (Ets-domain) UP00414A (Ets-domain) UP00417A (Ets-domain) UP00418A (Ets-domain) UP00420A (Ets-domain) UP00421A (Ets-domain) UP00423A (Ets-domain) |
| Binding Motifs: | UP00290A_1 gwrastTTCCGGAAyrywrr UP00013A_1 mmawACCGGAAGTkhwv UP00049A_1 rwTwtmCGgAAAwt UP00281A_1 mssabmrCGGArATwasdsgk UP00295A_1 sayhmrCGGAaATaagdcggw UP00305A_1 wyyCGGGyskmCGGAvmw UP00310A_1 srhssrCGGAAATAAsssdsh UP00323A_1 wmvcdyCGGAGATAwtkdkm UP00404A_1 abshACTTCCGGkwky UP00408A_1 mvwtACCGGAAGTrkwr UP00409A_1 kwAcsmGGAAGTwr UP00410A_1 mswtACCGGAAGYdsmr UP00412A_1 cdmaACwTCCGGtwyc UP00413A_1 wbkwACTTCCGGkwty UP00414A_1 crkkyACCGGAArtaaw UP00417A_1 stsmAywTCCGGtggy UP00418A_1 dcmktAYTTCCGGytts UP00420A_1 ackyACCGGAAGydmms UP00421A_1 mswbaCCGGAAGTrrma UP00423A_1 cdmaACWTCCGGtmvc UP00013A_2 cydtywTccsmcysmh UP00049A_2 ysCGtCGcktaawab UP00475A_1 wyydkaaCCGGCCGGmakakta |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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