Transcription Factor
| Accessions: | UP00323A (UniPROBE 20160601) |
| Names: | Not Available, Ydr520c |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Not Av |
| Description: | Putative transcription factor; contains the (Zn(II)2Cys6 motif; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; null mutant is viable and sensitive to caffeine |
| Length: | 142 |
| Pfam Domains: | 52-88 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 AGYNSASGKVRNSIRSIINHPEDSARAKERSETNSPKNNGNKKPRKKRKTFSCDTCRRVK 60 61 TRCDFEPFIGKCYRCNVLQLDCSLARNKDNEILNTLREDGLLKKINSINHNLGSFSHLNA 120 121 DSPNESQSSFEKNGTVNFDNYM |
| Interface Residues: | 46, 47, 57, 59, 60, 61, 62 |
| 3D-footprint Homologues: | 1f5e_P, 1hwt_C |
| Binding Motifs: | UP00323A_1 wmvcdyCGGAGATAwtkdkm |
| Binding Sites: | AATCTCCG ACGGAGAA ACGGAGAT ATCTCCGA ATCTCCGG ATTCTCCG ATTTCCGG ATTTTCCG CCGGAGAA CGGAAATA CGGAATTA CGGACATA CGGACTTA CGGAGAAA CGGAGATA CGGAGTTA CGGATTTA CGGGGATA GGAGATAA TCGGAGAA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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