Transcription Factor
| Accessions: | UP00412A (UniPROBE 20160601) |
| Names: | 1110005E01Rik, 8430401F14Rik, ERM, ETS translocation variant 5, ets variant gene 5, Etv5 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q9CXC9 |
| Description: | ets variant gene 5: ETS translocation variant 5 |
| Length: | 116 |
| Pfam Domains: | 17-98 Ets-domain |
| Sequence: (in bold interface residues) | 1 EPTMYREGPPYQRRGSLQLWQFLVTLLDDPANAHFIAWTGRGMEFKLIEPEEVARRWGIQ 60 61 KNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPDALFSMAFPDNQRPFL |
| Interface Residues: | 57, 69, 70, 72, 73, 74, 76, 77, 91 |
| 3D-footprint Homologues: | 6sjf_B, 3zp5_A, 7jsa_J, 4mhg_A, 2stt_A, 8ee9_F, 4uno_A, 3jtg_A, 1dux_F, 4lg0_B, 1yo5_C, 4bqa_A, 1awc_A, 4iri_A, 1bc8_C, 4l18_B |
| Binding Motifs: | UP00412A_1 cdmaACwTCCGGtwyc |
| Binding Sites: | AACCGGAA AACTTCCG ACATCCGG ACCGGAAA ACCGGAAC ACCGGAAG ACCGGATG AGTTCCGG ATTTCCGG CACCGGAA CACTTCCG CCGGAAAC CCGGAAGC CCGGAAGG CCGGATGC CTTCCGGA CTTCCGGC GACCGGAA TACCGGAA TTCCGGAA |
| Publications: | Wei G-H, Badis G, Berger MF, Kivioja T, Palin K, Enge M, Bonke M, Jolma A, Varjosalo M, Gehrke AR, Yan J, Talukder S, Turunen M, Taipale M, Stunnenberg HG, Ukkonen E, Hughes TR, Bulyk ML, Taipale J. Genome-wide analysis of ETS family DNA-binding in vitro and in vivo. The EMBO Journal. Epub 2010 Jun 1. doi:10.1038/emboj.2010.106 [Pubmed] |
| Related annotations: | PaperBLAST |
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