Transcription Factor
| Accessions: | UP00410A (UniPROBE 20160601) |
| Names: | Elk-1, Elk1, ETS domain-containing protein Elk-1, member of ETS oncogene family |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P41969 |
| Description: | ELK1, member of ETS oncogene family : ETS domain-containing protein Elk-1 |
| Length: | 104 |
| Pfam Domains: | 4-86 Ets-domain |
| Sequence: (in bold interface residues) | 1 DPSVTLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKTNMNYDKLS 60 61 RALRYYYDKNIIRKVSGQKFVYKFVSYPEVAGCSTEDCPPQPEV |
| Interface Residues: | 57, 58, 60, 61, 62, 64, 65, 79 |
| 3D-footprint Homologues: | 1dux_F, 7jsa_J, 3zp5_A, 8ee9_F, 4mhg_A, 2stt_A, 4uno_A, 3jtg_A, 4l18_B, 4lg0_B, 1yo5_C, 4bqa_A, 1awc_A, 4iri_A, 1bc8_C |
| Binding Motifs: | UP00410A_1 mswtACCGGAAGYdsmr |
| Binding Sites: | AACCGGAA AACTTCCG ACATCCGG ACCGGAAA ACCGGAAC ACTTCCGC ACTTCCGG AGTTCCGG ATTTCCGG CACCGGAA CACTTCCG CCGGAAAC CCGGAAGC CGGAAGTA CGGAAGTC CTTCCGGA CTTCCGGC GACCGGAA TACCGGAA TTCCGGAA |
| Publications: | Wei G-H, Badis G, Berger MF, Kivioja T, Palin K, Enge M, Bonke M, Jolma A, Varjosalo M, Gehrke AR, Yan J, Talukder S, Turunen M, Taipale M, Stunnenberg HG, Ukkonen E, Hughes TR, Bulyk ML, Taipale J. Genome-wide analysis of ETS family DNA-binding in vitro and in vivo. The EMBO Journal. Epub 2010 Jun 1. doi:10.1038/emboj.2010.106 [Pubmed] |
| Related annotations: | PaperBLAST |
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