Transcription Factor

Accessions: MAX_Full (HumanTF2 1.0)
Names: CSAID-binding protein, CSBP, Cytokine suppressive anti-inflammatory drug-binding protein, EC 2.7.11.24, MAP kinase 14, MAP kinase MXI2, MAP kinase p38 alpha, MAPK 14, MAX, MAX-interacting protein 2, Mitogen-activated protein kinase 14, Mitogen-activated protein kinase p38 alpha, MK14_HUMAN, SAPK2a, Stress-activated protein kinase 2a
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Uniprot: Q16539
Notes: Ensembl ID: ENSG00000125952; Construct type: Full length protein used in HT-SELEX with mixed proteins; TF family: bHLH; Clone source: Jolma et al. 2013
Length: 161
Pfam Domains: 24-74 Helix-loop-helix DNA-binding domain
Sequence:
(in bold interface residues)
1 MSDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASR 60
61 AQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALEKARSSAQLQTNYPSSDN 120
121 SLYTNAKGSTISAFDGGSDSSSESEPEEPQSRKKLRMEAS*
Interface Residues: 25, 27, 28, 29, 31, 32, 35, 36, 40, 60
3D-footprint Homologues: 7z5k_B, 1a0a_B, 1an4_A, 6g1l_A, 1am9_A, 7ssa_L, 5i50_B, 8osl_O, 7d8t_A, 7xi3_A, 5nj8_D, 7f2f_B, 5eyo_A, 7xq5_A, 5v0l_A, 7rcu_E, 5gnj_I
Binding Motifs: ERF_MAX aCCGGAAaCACGTGs
FLI1_MAX accGGAAaCACGTGg
GCM1_MAX_1 rbCACGTGsrTGckGGyr
GCM1_MAX_2 rgCACGTGkkyvsgggcgrTGCGGGyrs
GCM1_MAX_2_3 aTGCGGGyrgsgmgCACGTGg
GCM1_MAX_2_3_4 CACGTGgwTgcgGGy
GCM1_MAX_2_3_4_5 rgCACGTGsyyrvkggssrTGCGGGTrs
GCM1_MAX_2_3_4_5_6 aTGCGGGyrggrrgCACGTGs
GCM2_MAX aTGcgGGyraCAyGTG
MEIS1_MAX wTGACrbgtsrvCACGTGc
MYBL1_MAX_1 sCACGTGcyyAACsgyy
MYBL1_MAX_2 yAACskhhryvtggagCACGTG
MYBL1_MAX_2_3 yAACsgymgwvgcrrrsCACGTG
TEAD4_MAX_1 GGwATGyrCACGTG
TEAD4_MAX_2 rCATwCCdhmrrsCACGTG
TEAD4_MAX_2_3 rmATwCCwcwhravCACGTG
TFAP2C_MAX_1 trsCCysrGGsgrkCACGTGs
TFAP2C_MAX_2 trsCCysrGGssrwrCACGTGs
TFAP2C_MAX_2_3 tgsCCysrGGssawrbsssssrrsCACGTGs
TFAP2C_MAX_2_3_4 tgsCCysrGGssayrysssvssrrsCACGTG
TFAP4_MAX_1 yCAGCTGrmvrsCACGTGs
TFAP4_MAX_2 dCAGCTGwbmrgmgCACGTGs
TFAP4_MAX_2_3 wCAsCTGdtbssCACGTGs
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Related annotations: PaperBLAST

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