DNA Binding Motif

						

			
Accessions: GCM1_MAX_2_3_4 (HumanTF2 1.0)

			
Names: GCM1_MAX
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: CACGTGgwTgcgGGy
Weblogo: 
PSSM: P0      A      C      G      T
01     20   3121     31      0      C
02   3121     45     41     23      A
03     12   3121      0     91      C
04    108     19   3121     12      G
05     31     38     42   3121      T
06      0     16   3121      5      G
07    119    763   1802    437      g
08    979    577    657    908      w
09    219    481    123   2297      T
10   1036    285   3121    156      g
11    672   3121    548    664      c
12    525     86   3121   1222      g
13     48    240   3121    186      G
14    105    144   3121     42      G
15    431   1157    326   1963      y
Type: Heterodimer
Binding TFs: GCM1_TF1 (GCM motif protein)
MAX_TF2 (Helix-loop-helix DNA-binding domain)
MAX_Full (Helix-loop-helix DNA-binding domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.