DNA Binding Motif
| Accessions: | GCM1_MAX_2_3 (HumanTF2 1.0) |
| Names: | GCM1_MAX |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
| Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
| Length: | 21 |
| Consensus: | aTGCGGGyrgsgmgCACGTGg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 4499 886 1721 235 a 02 356 177 257 6219 T 03 1798 221 6219 5 G 04 977 6219 709 461 C 05 468 138 6219 975 G 06 2 15 6219 43 G 07 0 11 6219 15 G 08 217 1805 324 3873 y 09 1661 917 2729 912 r 10 1012 1181 3055 972 g 11 1288 1574 2223 1134 s 12 1507 863 2579 1271 g 13 2070 1708 1530 911 m 14 859 1419 2968 974 g 15 49 6219 12 0 C 16 6219 0 115 48 A 17 10 6219 62 362 C 18 347 0 6219 3 G 19 64 32 14 6219 T 20 4 5 6219 23 G 21 941 1474 2585 1220 g |
| Type: | Heterodimer |
| Binding TFs: | GCM1_TF1 (GCM motif protein) MAX_TF2 (Helix-loop-helix DNA-binding domain) MAX_Full (Helix-loop-helix DNA-binding domain) |
| Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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