DNA Binding Site
| Accessions: | CGGAAATA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CGGAAATA |
| Type: | Heterodimer |
| Binding TFs: | UP00310A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00090A / UP00407A (Ets-domain) UP00281A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00292A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00295A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00300A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00323A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00415A (Ets-domain) UP00418A (Ets-domain) UP00422A (Ets-domain) UP00424A (Ets-domain) UP00458A |
| Binding Motifs: | UP00090A_1 wwcmmGGAArTwa UP00281A_1 mssabmrCGGArATwasdsgk UP00292A_1 smwhrwWTCTCCGArvccrm UP00295A_1 sayhmrCGGAaATaagdcggw UP00300A_1 skgkgwAwyTCCGCCbshkks UP00310A_1 srhssrCGGAAATAAsssdsh UP00323A_1 wmvcdyCGGAGATAwtkdkm UP00407A_1 vhykwAyTTCCKgsttr UP00415A_1 vtgwryTTCCGGyarc UP00418A_1 dcmktAYTTCCGGytts UP00422A_1 rygaAyTTCCGGtaky UP00424A_1 rbsaAyTTCCGGTwrw UP00090A_2 gytcmaaaAAaAamydy UP00458A_1 / UP00458A_2 scrwycyCGGAGwTAAcgccsky UP00458A_3 TCGGCCGA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.