Transcription Factor
| Accessions: | UP00292A (UniPROBE 20160601) |
| Names: | N3531, Putative transcriptional regulatory protein in BIO3-HXT17 intergenic region, Ynr063w |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P53749 |
| Description: | Putative zinc-cluster protein of unknown function |
| Length: | 102 |
| Pfam Domains: | 14-51 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 DRSKDARKRSISLACTVCRKRKLKCDGNKPCGRCIRLNTPKECIYNIDKRKDKRKIKNGS 60 61 KVFLFKNNTIDNGNNSILENKGLNEDLSSHIYEKEAPKFDSD |
| Interface Residues: | 7, 8, 19, 21, 22, 23, 24, 36, 37, 51, 91, 95 |
| 3D-footprint Homologues: | 1f5e_P, 2er8_C, 6o19_A, 1hwt_C, 1pyi_A, 6gys_C, 3coq_A, 1d66_B, 7uik_T, 1zme_D, 3vh0_A, 1gji_A |
| Binding Motifs: | UP00292A_1 smwhrwWTCTCCGArvccrm |
| Binding Sites: | AACTCCGA AATCTCCG AATTCCGA ACGGAGAA ATATCCGA ATCTCCGA ATCTCCGC ATCTCCGG ATTCTCCG ATTTCCGA CATCTCCG CGGAAATA CGGAGAAA CGGAGATA CGGAGATC CGGAGTTA CGGATATA CTCGGAGA TCGGAAAA TCGGAGAA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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