Transcription Factor
| Accessions: | UP00424A (UniPROBE 20160601) |
| Names: | EG232974, Gm4881, predicted gene 4881 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | n/a |
| Description: | predicted gene 4881: Ensembl Gene ID:ENSMUSG00000042789,Transcript ID:ENSMUST00000061154.4,Protein ID:ENSMUSP00000056357 |
| Length: | 116 |
| Pfam Domains: | 16-97 Ets-domain |
| Sequence: (in bold interface residues) | 1 RPDWAYKPESSPGSRQIQLWHFILELLQKEEYQGVIAWQGDYGEFVIKDPDEVARLWGIR 60 61 KCKPHMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFSKVVLVNYPLLDVAAAAT |
| Interface Residues: | 14, 69, 70, 72, 73, 74, 76, 77, 81, 91 |
| 3D-footprint Homologues: | 3zp5_A, 4uno_A, 3jtg_A, 1dux_F, 7jsa_J, 4mhg_A, 2stt_A, 8ee9_F, 4l18_B, 5d5w_B, 4lg0_B, 1yo5_C, 4bqa_A, 1awc_A, 4iri_A, 1bc8_C |
| Binding Motifs: | UP00424A_1 rbsaAyTTCCGGTwrw |
| Binding Sites: | AACCGGAA ACATCCGG ACCGGAAA ACCGGAAG ACCGGATG ACTTCCGA ACTTCCGC ACTTCCGG CACCGGAA CACTTCCG CATTTCCG CCGGAAAC CCGGAAGC CCGGATGC CGGAAACA CGGAAATA CGGAAGTA CGGAAGTC GACCGGAA TTCCGGAA |
| Publications: | Wei G-H, Badis G, Berger MF, Kivioja T, Palin K, Enge M, Bonke M, Jolma A, Varjosalo M, Gehrke AR, Yan J, Talukder S, Turunen M, Taipale M, Stunnenberg HG, Ukkonen E, Hughes TR, Bulyk ML, Taipale J. Genome-wide analysis of ETS family DNA-binding in vitro and in vivo. The EMBO Journal. Epub 2010 Jun 1. doi:10.1038/emboj.2010.106 [Pubmed] |
| Related annotations: | PaperBLAST |
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