DNA Binding Site
| Accessions: | CACGGCAC (UniPROBE 20160601) |
| Organisms: | Saccharomyces cerevisiae, Arabidopsis thaliana |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CACGGCAC |
| Type: | Heterodimer |
| Binding TFs: | UP00468A (Zinc finger, C2H2 type) UP00338A (Zinc finger, C2H2 type, C2H2-type zinc finger) UP00570A (No apical meristem (NAM) protein) UP00571A (No apical meristem (NAM) protein) UP00573A (No apical meristem (NAM) protein) UP00574A (No apical meristem (NAM) protein) UP00576A (No apical meristem (NAM) protein) UP00579A (No apical meristem (NAM) protein) UP00580A (No apical meristem (NAM) protein) |
| Binding Motifs: | UP00338A_1 yrawygGyGCCGyrysackh UP00468A_1 tcatatmGyGCCGYryscabrwb UP00570A_1 tACACGbmACyk UP00570A_2 maCACGsmActt UP00571A_1 vyaCACGgmAcyr UP00571A_2 skwYACGGmAcTt UP00573A_1 raAGAGmCGTAt UP00573A_2 rAGAGaCGTGyk UP00574A_1 gtTTACGTAAycw UP00574A_2 mwayACGCAAcyk UP00576A_1 stACACGCAAcC UP00576A_2 gggTAAGkAAwht UP00579A_1 wrCACGGmACyt UP00579A_2 gtACACGsAACy UP00580A_1 waCACGymACyb UP00580A_2 rkACACGsAACy |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
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