Transcription Factor
| Accessions: | UP00574A (UniPROBE 20160601) |
| Names: | ACTIVATED BY AP3/PI, ANAC029, Arabidopsis NAC domain containing protein 29, ARABIDOPSIS NAC DOMAIN PROTEIN 029, At1g69490, ATNAP, F10D13_14, F10D13.14, NAC domain-containing protein 29, NAC transcription factor protein family, NAC-LIKE, NAP, Protein NAC-LIKE |
| Organisms: | Arabidopsis thaliana |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Description: | NAC transcription factor protein family: Transcription factor of the NAC family involved in senescence. May function in the transition between active cell division and cell expansion. |
| Length: | 166 |
| Pfam Domains: | 9-134 No apical meristem (NAM) protein |
| Sequence: (in bold interface residues) | 1 MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEF 60 61 GENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPP 120 121 KGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASK |
| Interface Residues: | 75, 77, 80, 81, 82, 83, 91, 93, 95, 115, 119, 120, 121, 124 |
| 3D-footprint Homologues: | 7xp3_B, 6ycq_A, 3swp_A |
| Binding Motifs: | UP00574A_1 gtTTACGTAAycw UP00574A_2 mwayACGCAAcyk |
| Binding Sites: | ACGTAATC ATACGTAA ATTACGTA CACGGCAC GTTACGTA TTACGTAA ACACGCAA ACACGTAA ACACGTCA ACGCAACC ACGCAACT ACGCAATC ACGTAACT AGACGTAA ATACGCAA CACGCAAC CACGTAAC GATACGTA GTTCCGTA GTTGCGTA |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
| Related annotations: | PaperBLAST |
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