Database 'JASPAR 2024' (DNA Binding Motifs 4301-4350)

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If you want to search for a protein sequence or a DNA motif use the Sequence Search Form.

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AccessionsNamesConsensusOrganismsDescription and notes
PF0125.1RAAGNYNNCTTYrAAGkydyCTTyphylogenetic
PF0111.1RACCACARrACCACArphylogenetic
PF0066.1RACTNNRTTTNCrACTmCATTTCCphylogenetic
MA1416.1RAMOSA1GAGAGAGAGAGAGAChIP-seq, PBM
MA0359.1RAP1CACCCRtACASaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0359.2RAP1drTGTaTGGGTGTwwSaccharomyces cerevisiaeChIP-exo
MA0359.3RAP1rTGTaTGGGTGTSaccharomyces cerevisiaeChIP-exo
MA1679.1RAP2-1cdyCACCGACAhtdhArabidopsis thalianaDAP-seq
MA1679.2RAP2-1CACCGACAArabidopsis thalianaDAP-seq
MA0980.1RAP2-10GCGCCGCCArabidopsis thalianaPBM
MA0980.2RAP2-10yyrCCGACAawwArabidopsis thalianaDAP-seq
MA0980.3RAP2-10rCCGACAArabidopsis thalianaDAP-seq
MA1266.2RAP2-11ycdycGCCGkCArabidopsis thalianaDAP-seq
MA1256.2RAP2-12rryGGCGGCGgArabidopsis thalianaDAP-seq
MA1051.1RAP2-3gCGCCGCmArabidopsis thalianaPBM
MA1795.1RAP2-4crCCGaCmawArabidopsis thalianaPBM
MA1795.2RAP2-4crCCGaCmArabidopsis thalianaPBM
MA1052.1RAP2-6SCGCCGCCArabidopsis thalianaPBM
MA1796.1RAP2-7KaCGRGGwArabidopsis thalianaPBM
MA1251.2RAP2-9CACCGACmwArabidopsis thalianaDAP-seq
MA1216.1RAP21dtGkCGGYGghgrArabidopsis thalianaDAP-seq
MA1249.1RAP210wwkTGTCGGCrrmrrArabidopsis thalianaDAP-seq
MA1266.1RAP2-11, RAP211cykycdycGCCGkCkArabidopsis thalianaDAP-seq
MA1256.1RAP2-12, RAP212cgghgrwrryGGCGGCGgmgrArabidopsis thalianaDAP-seq
MA1221.1RAP2-6, RAP26tkrCGGCGGmGghggArabidopsis thalianaDAP-seq
MA0729.1RARArAGGTCAAAAGGTCAAkkHomo sapiensHT-SELEX
PB0053.1Rara_1kmycAAAGGTCAcstgMus musculusuniversal protein binding microarray (PBM)
PB0157.1Rara_2akagysGGGTCAakkmMus musculusuniversal protein binding microarray (PBM)
MA0159.1RARA::RXRArGkTCAysgrsAGKTCAHomo sapiensCOMPILED
MA1149.1RARA::RXRGrrGGTCAwgkarrGGtCAHomo sapiensSMiLE-seq
MA1149.2RARA::RXRGrGGTCAwgkarrGGtCAHomo sapiensSMiLE-seq
MA0730.1RARA, RARA(var.2)AGGTCAysyaRAGGTCAHomo sapiensHT-SELEX
MA0857.1RarbaAAGGTCAAAAGGTCAMus musculusHT-SELEX
MA1552.2RARBrAGGTCrTGACCTHomo sapiensHT-SELEX
MA0858.1Rarb, Rarb(var.2)AGGTCAhmyarAGGTCAMus musculusHT-SELEX
MA1552.1RARB, RARB(var.3)rAGGTCrTGACCTyHomo sapiensHT-SELEX
MA0859.1RargrRGGTCAAAAGGTCAaMus musculusHT-SELEX
MA0859.2RargrRGGTCAAAAGGTCAMus musculusHT-SELEX
MA1553.2RARGAGGTCATGACCTyHomo sapiensHT-SELEX
MA0860.1Rarg, Rarg(var.2)AAGGTCAmsArAGGTCAMus musculusHT-SELEX
MA1553.1RARG, RARG(var.3)rAGGTCATGACCTyHomo sapiensHT-SELEX
MA0582.1RAV1mwgCAACAkwwaArabidopsis thalianaSELEX
MA0582.2RAV1gCAACAArabidopsis thalianaSELEX
MA0583.1RAV1, RAV1(var.2)wtCaCCTGrssyArabidopsis thalianaSELEX
MA1797.1RAV2GCAACATaArabidopsis thalianaPBM
MA0718.1RAXryyAATTAryHomo sapiensHT-SELEX
MA0718.2RAXyAATTAHomo sapiensHT-SELEX
MA1910.1RaxwwwtwaaTTAATTrrwtwwwSELEX
MA1910.2RaxTTAATTSELEX
PH0156.1RaxwscayYAATTRryssmyMus musculusuniversal protein binding microarray (PBM)
		

				

		


			

	
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