Database 'JASPAR 2024' (DNA Binding Motifs 2451-2500)

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If you want to search for a protein sequence or a DNA motif use the Sequence Search Form.


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AccessionsNamesConsensusOrganismsDescription and notes
PH0075.1Hoxd10mrkgyAATAAAAtwwwwMus musculusuniversal protein binding microarray (PBM)
MA0908.1HOXD11rTCGTAAAawHomo sapiensHT-SELEX
MA0908.2HOXD11rTCGTAAAaHomo sapiensHT-SELEX
PH0076.1Hoxd11ywarGTCGTAAAawyhtMus musculusuniversal protein binding microarray (PBM)
MA0873.1HOXD12rgTCGTAAAAmHomo sapiensHT-SELEX
MA0873.2HOXD12rgTCGTAAAAHomo sapiensHT-SELEX
PH0077.1Hoxd12ywavGTCGTAAAatywtMus musculusuniversal protein binding microarray (PBM)
MA1958.1HOXD12::ELK1rrsCGGAAGTyGTAAAaHomo sapiensHT-SELEX
MA1958.2HOXD12::ELK1CGGAAGTyGTAAAHomo sapiensHT-SELEX
UN0567.1HOXD12::ELK3kTTwAykRCCGGAAgtdHomo sapiensHT-SELEX
UN0567.2HOXD12::ELK3TTwAykRCCGGAAgtHomo sapiensHT-SELEX
UN0568.1HOXD12::ETV1rsCGGAAGTCRTAAAwHomo sapiensHT-SELEX
UN0568.2HOXD12::ETV1rsCGGAAGTCRTAAAHomo sapiensHT-SELEX
UN0569.1HOXD12::ETV4aCCGGAAGTCGTWAAmHomo sapiensHT-SELEX
UN0569.2HOXD12::ETV4CCGGAAGTCGTWAAmHomo sapiensHT-SELEX
MA0909.1HOXD13symATAAAAmHomo sapiensHT-SELEX
MA0909.2HOXD13ssCMATAAAmCHomo sapiensHT-SELEX
MA0909.3Hoxd13asCAATAAAaMus musculus
MA0909.4Hoxd13CAATAAAMus musculus
PH0078.1Hoxd13mwwyyAATAAAAhymhMus musculusuniversal protein binding microarray (PBM)
MA0912.1
PH0079.1
Hoxd3ytgrgkTAATTAmcstMus musculusuniversal protein binding microarray (PBM)
MA0912.2HOXD3CTAATTAcHomo sapiensHT-SELEX
MA1507.1HOXD4rYmATTArHomo sapiensHT-SELEX
MA1507.2HOXD4YmATTAHomo sapiensHT-SELEX
MA0910.1
PH0080.1
Hoxd8taadTAATTAATrgctwMus musculusuniversal protein binding microarray (PBM)
MA0910.2HOXD8gymATTAmHomo sapiensHT-SELEX
MA0910.3HOXD8gymATTAHomo sapiensHT-SELEX
MA0913.1Hoxd9gymATwAAawMus musculusHT-SELEX
MA0913.2HOXD9GymATAAAAhHomo sapiensHT-SELEX
MA0913.3HOXD9GymATAAAAHomo sapiensHT-SELEX
MA2314.1hr3GGTCACacDrosophila melanogasterChIP-seq
MA2243.1Hr38AAAGGTCADrosophila melanogasterSELEX
MA2244.1Hr39CAAGGtCrDrosophila melanogasterSELEX
UN0773.1Hr4AAGGTCADrosophila melanogasterbacterial 1-hybrid
MA2245.1Hr78wrAGGTCADrosophila melanogasterbacterial 1-hybrid
UN0774.1Hr83rAAGTCAmmvtrGmDrosophila melanogasterbacterial 1-hybrid
UN0775.1Hr96rGTGCAyrTGyACyDrosophila melanogasterSELEX
MA1387.2HRS1atcgAAkATTCyArabidopsis thalianaDAP-seq
MA1458.1HsfwwTTCcAGAAwwDrosophila melanogasterChIP-seq
MA1458.2HsfTTCcAGAADrosophila melanogasterChIP-seq
MA2169.1hsf-1TTCyAGAACaenorhabditis elegansChIP-seq
MA0319.1HSF1ATGGAAcaSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0319.2HSF1ATGGAAcSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0486.1HSF1yTTCyrGAAsbTTCyHomo sapiensChIP-seq
MA0486.2HSF1TTCTaGAAyrTTCHomo sapiensHT-SELEX
MA1887.1Hsf1-2-4tmGAaydTTCTAGAAhdttcSELEX
MA1887.2Hsf1-2-4GAaydTTCTAGAAhdttcSELEX
MA0770.1HSF2TTCTAGAAyrTTCHomo sapiensHT-SELEX
MA0771.1HSF4TTCtrGAAyrTTCHomo sapiensHT-SELEX
UN0125.1HSF5yvGAAygytrssgvcssyaACRTTCbrHomo sapiens


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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.