DNA Binding Motif

						

			
Accessions: MA1958.2 (JASPAR 2024)

			
Names: HOXD12::ELK1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 13
Consensus: CGGAAGTyGTAAA
Weblogo: 
PSSM: P0      A      C      G      T
01     95    487     34      5      C
02      3      0    487      0      G
03      0      0    487      8      G
04    487      1      0      0      A
05    487      2      0     29      A
06     17      3    487      0      G
07      7      0      0    487      T
08     52    303      5    127      y
09     54      0    487      0      G
10      0      0      7    487      T
11    487     10      5     75      A
12    487      0      5      0      A
13    487     59      3     27      A
Type: Heterodimer
Binding TFs: P35452 (Homeobox domain)
P35452
			
Publications: Guturu H, Doxey AC, Wenger AM, Bejerano G. Structure-aided prediction of mammalian transcription factor complexes in conserved non-coding elements. Philos Trans R Soc Lond B Biol Sci 368:20130029 (2013). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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