Database 'JASPAR 2024' (DNA Binding Motifs 4551-4600)

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If you want to search for a protein sequence or a DNA motif use the Sequence Search Form.

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AccessionsNamesConsensusOrganismsDescription and notes
MA1159.1SGR5araAwAAGACAAAAwArabidopsis thalianaDAP-seq
MA1159.2SGR5raAwAAGACAAAAArabidopsis thalianaDAP-seq
UN0836.1SHN2wCCrCCgCCrCCdCCrCCgCcArabidopsis thalianaDAP-seq
MA0630.1SHOXyTAATTrrHomo sapiensPBM
MA0630.2SHOXTAATTrHomo sapiensPBM
MA0720.1Shox2yyAATTArMus musculusHT-SELEX
MA0720.2Shox2yAATTAMus musculusHT-SELEX
PH0160.1Shox2ckmsyTAATTArtyrdsMus musculusuniversal protein binding microarray (PBM)
UN0785.1simgwACGTGACcDrosophila melanogasterbacterial 1-hybrid
UN0786.1simagTACGTGACDrosophila melanogasterbacterial 1-hybrid
MA0380.1SIP4yYCCGgrSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0380.2SIP4YCCGgrSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA1118.1SIX1GwAACCTGAkmHomo sapiensChIP-seq
MA1118.2SIX1GwAACCTGAHomo sapiensChIP-seq
PH0161.1Six1ratrGGGTATCAykwbtMus musculusuniversal protein binding microarray (PBM)
UN0469.1Six1-2hgwaahaTGATACccwahmcSELEX
UN0469.2Six1-2TGATACSELEX
MA1119.1SIX2wwcTGaAACCTGAtmyHomo sapiensChIP-seq
MA1119.2SIX2TGaAACCTGAtHomo sapiensChIP-seq
PH0162.1Six2rakrGGGTATCAcdwytMus musculusuniversal protein binding microarray (PBM)
MA0631.1
PH0163.1		Six3rAtrGGGTATCAywwwtMus musculusuniversal protein binding microarray (PBM)
MA0631.2Six3AtrGGGTATCAMus musculusPBM
MA1912.1Six3/6wtgwawwTGATACssywhwhSELEX
MA1912.2Six3/6TGATACSELEX
MA0204.1Six4TGAyACDrosophila melanogasterbacterial 1-hybrid
MA2001.1Six4gwAACCTGAbmMus musculus
MA2001.2Six4AACCTGAMus musculus
PH0164.1Six4atrmaTGACACCthybrMus musculusuniversal protein binding microarray (PBM)
PB0059.1Six6_1rwwrGGGTATCAhwtwtMus musculusuniversal protein binding microarray (PBM)
PH0165.1Six6_1datrGGGTATCAhwwwtMus musculusuniversal protein binding microarray (PBM)
PB0163.1Six6_2mwbskATATATmcryytMus musculusuniversal protein binding microarray (PBM)
PH0166.1Six6_2rwwrGGGTATCAwtwytMus musculusuniversal protein binding microarray (PBM)
MA1405.1SIZF2gACTGwCAGTSolanum lycopersicumPBM
MA1405.2SIZF2ACTGwCAGTSolanum lycopersicumPBM
MA0547.1skn-1aAaATGATGAyAAwwCaenorhabditis elegansChIP-seq
MA0547.2skn-1aAaATGATGAyAAwCaenorhabditis elegansChIP-seq
MA0381.1SKN7GGCCrkSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0381.2SKN7GGCCrSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0382.1SKO1ACGTAwTGSaccharomyces cerevisiaeCOMPILED
MA0382.2SKO1wwyrATGACGTMAttkwSaccharomyces cerevisiaeChIP-exo
MA0382.3SKO1ATGACGTMAtSaccharomyces cerevisiaeChIP-exo
UN0135.1SKOR1wwrmkGTAATTAmsHomo sapiens
UN0136.1SKOR2tarckGTAATTAAgHomo sapiens
MA0244.1slboATKrCamADrosophila melanogasterDNaseI footprinting
MA0245.1sloutTAATtrDrosophila melanogasterbacterial 1-hybrid
MA0458.1slp1kTGTTTayrywDrosophila melanogasterbacterial 1-hybrid
MA0458.2slp1TGTTTayrywDrosophila melanogasterbacterial 1-hybrid
MA2272.1slp2rTAAACAaDrosophila melanogasterbacterial 1-hybrid
MA0925.1sma-4arTGTCTGGrcCaenorhabditis elegansPBM
MA0925.2sma-4TGTCTGGCaenorhabditis elegansPBM
		

				

		


			

	
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