DNA Binding Site

						

			
Accessions: GGACCCCC (UniPROBE 20160601)

			
Organisms: Mus musculus, Drosophila melanogaster
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: GGACCCCC
Type: Heterodimer
Binding TFs: UP00006A (Zinc finger, C2H2 type, Zinc-finger double-stranded RNA-binding, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00024A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00057A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00102A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00047A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00537A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00539A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Motifs: UP00006A_1 smCCCCCgGGGGggt
UP00024A_1 ywwsGACCCCCCayrd
UP00047A_1 rrgCCCCCCwaawat
UP00057A_1 bmCCCCCgGGGGggt
UP00102A_1 smCCCCcgGGGGGg
UP00006A_2 kwdCaCAGCAkGmsa
UP00024A_2 wwTAttAwtAAAga
UP00047A_2 ywkrvGACCACCaktry
UP00057A_2 ycdCvCAGCAkGara
UP00102A_2 ymdCrCAGCAkGmrw
UP00537A_1 raagccmCCskGGGGGGcyrays
UP00537A_2 kymwtvyAGGgGGTmswkdtga
UP00539A_1 / UP00539A_2 kyrshvrGACCACCCakrdygy
UP00539A_3 rytmyyagCCyCCCACgtyrksk
UP00539A_4 / UP00539A_5 ktmsdwrGACCACCCAgrwdgb
UP00539A_6 wrykascgkGGGTGGCrrssray
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.