Transcription Factor
| Accessions: | UP00361A (UniPROBE 20160601) |
| Names: | HLH-15 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q18590 |
| Description: | Helix Loop Helix Protein 15 : none available |
| Length: | 88 |
| Pfam Domains: | 33-83 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 LMEDGGLDTTSEEYRKLSKAERRKRRRATPKYRNLHATRERIRVESFNMAFSQLRALLPT 60 61 LPVEKKLSKIEILRFSIAYISFLDNLLQ |
| Interface Residues: | 36, 37, 39, 40, 41, 43, 44 |
| 3D-footprint Homologues: | 4h10_A, 8osl_P, 2ypa_A, 7z5k_B, 2ypa_B, 6od3_F, 2ql2_D |
| Binding Motifs: | UP00361A_1 agwaaaawrwhdwr UP00361A_2 rrmsCAsCTGbGccmt |
| Binding Sites: | AACACCTG AACAGCTG ACACCTGC ACACCTGT ACAGCTGC ACAGCTGG ACAGCTGT ACCACCTG ACCAGCTG AGCAGCTG AGCAGGTG CACAGCTG CACAGGTG CACCTGCG CAGCTGCG CAGGTGCG CCACCTGC GCAGCTGC CAGCTGGG CCAGCTGG |
| Publications: | Grove C.A, De Masi F, Barrasa M.I, Newburger D.E, Alkema M.J, Bulyk M.L, Walhout A.J. A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138:314-27 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.