DNA Binding Site
| Accessions: | AGCAGCTG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | AGCAGCTG |
| Type: | Heterodimer |
| Binding TFs: | UP00099A (Helix-loop-helix DNA-binding domain) UP00361A (Helix-loop-helix DNA-binding domain) UP00384A (Helix-loop-helix DNA-binding domain) UP00548A (Helix-loop-helix DNA-binding domain) UP00548D (Helix-loop-helix DNA-binding domain) |
| Binding Motifs: | UP00099A_1 ytyarCAGCTGCtvytk UP00361A_1 agwaaaawrwhdwr UP00099A_2 bymwcCCcryccyrty UP00361A_2 / UP00384A_5 rrmsCAsCTGbGccmt UP00548A_1 sGgamrGrCACGTGtCsyhCysy UP00548D_1 mrkrkrkRACAGcTGTymgrkmm |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.