DNA Binding Site
| Accessions: | CACCTGCG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Caenorhabditis elegans, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CACCTGCG |
| Type: | Heterodimer |
| Binding TFs: | UP00046A (Helix-loop-helix DNA-binding domain) UP00361A (Helix-loop-helix DNA-binding domain) UP00369A (Helix-loop-helix DNA-binding domain) UP00379A (Helix-loop-helix DNA-binding domain) UP00384A (Helix-loop-helix DNA-binding domain) UP00621A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) UP00621B (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) UP00621C (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) |
| Binding Motifs: | UP00046A_1 atcmvCAGGTGcraamw UP00361A_1 agwaaaawrwhdwr UP00369A_1 mawwaawaAaadgw UP00046A_2 arrgcCAGATGkyyssg UP00361A_2 / UP00384A_5 rrmsCAsCTGbGccmt UP00369A_2 / UP00384A_8 arwwyCACCTGYthawy UP00379A_2 / UP00384A_7 mrtrmCACCTGCtaayy UP00621A_1 wmkaratrCACCTGyTakwhmk UP00621B_1 wwwmrakrCACCTGyTakwhaw UP00621C_1 tadarAwrCACCTGyTakwyad |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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