DNA Binding Site
| Accessions: | TAATTACA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Drosophila melanogaster, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | TAATTACA |
| Type: | Heterodimer |
| Binding TFs: | UP00063A / UP00391A (Homeobox domain) UP00110A (Homeobox domain) UP00123A (Homeobox domain) UP00132A (Homeobox domain) UP00137A (Homeobox domain) UP00154A (Homeobox domain) UP00162A (Homeobox domain) UP00174A (Homeobox domain) UP00182A (Homeobox domain) UP00233A (Homeobox domain) UP00241A (Homeobox domain) UP00262A (Homeobox domain, Homeobox KN domain) UP00512A (Homeobox domain) UP00596A (Homeobox domain) UP00596B (Homeobox domain) UP00596C (Homeobox domain) |
| Binding Motifs: | UP00063A_1 tkgagbTAATTAry UP00110A_1 bcrcdaTAATTAcmswc UP00123A_1 kkmsTAATTAGkgshv UP00132A_1 ymcmGCTAATTAGckkw UP00137A_1 wravcTMATKAgykrrw UP00154A_1 kmrmdaTAATTAcmswm UP00162A_1 wvarcTAATTAgygswc UP00174A_1 amggTAATTAscymAd UP00182A_1 amgkTAATTACcymak UP00233A_1 rvkgTAATTAsmycAg UP00241A_1 ytgrgkTAATTAmcst UP00262A_1 mgwaTTAATTAAwwahk UP00391A_1 tygmrbTAATTAry UP00063A_2 aarawCbATTArsr UP00512A_1 aawraarGGTAATTAmydkwkw UP00596A_2 kkmbtrstTAATTAakwrtmds UP00596B_1 kkmcgcgTTAATTAAkmmtcgr UP00596C_1 kkcsrmgtTAATTAakmatcgg UP00596C_2 wtmtawGkTAATTAhChhAdwaa |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.