DNA Binding Site
| Accessions: | AGCTGTCA (UniPROBE 20160601) |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | AGCTGTCA |
| Type: | Heterodimer |
| Binding TFs: | UP00122A (Homeobox domain, Homeobox KN domain) UP00186A (Homeobox domain, Homeobox KN domain) UP00203A (Homeobox domain, Homeobox KN domain) UP00205A (Homeobox domain, Homeobox KN domain) UP00210A (Homeobox domain, Homeobox KN domain) UP00226A (Homeobox domain, Homeobox KN domain) UP00258A (Homeobox domain, Homeobox KN domain) |
| Binding Motifs: | UP00122A_1 dakwwTGACAGCTsskw UP00186A_1 wasbAsCTGTCAWwac UP00203A_1 wrmsAsCTGTCAawmc UP00205A_1 aarsrsCTGTCAathy UP00210A_1 wadbAsCTGTCAwwmc UP00226A_1 warsAsCTGTCAAway UP00258A_1 aacyAGCTGTCAAwmc |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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