DNA Binding Site
| Accessions: | AATTTCCG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Plasmodium falciparum |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | AATTTCCG |
| Type: | Heterodimer |
| Binding TFs: | UP00310A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00049A (SAND domain) UP00090A / UP00407A (Ets-domain) UP00282A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00283A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00295A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00298A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00314A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00430A (AP2 domain) |
| Binding Motifs: | UP00283A_1 TCCGynnnnnnnnnCGGA UP00049A_1 rwTwtmCGgAAAwt UP00090A_1 wwcmmGGAArTwa UP00282A_1 ywcymrAAATTCCGkkckhy UP00295A_1 sayhmrCGGAaATaagdcggw UP00298A_1 tykgswTAwaTCCGraatbtd UP00310A_1 srhssrCGGAAATAAsssdsh UP00314A_1 awctywAwTTyyCCGrwkwwy UP00407A_1 vhykwAyTTCCKgsttr UP00049A_2 ysCGtCGcktaawab UP00090A_2 gytcmaaaAAaAamydy UP00430A_1 cstagwwAwTTTCCsayttarmy |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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