Transcription Factor
| Accessions: | UP00298A (UniPROBE 20160601) |
| Names: | FUN43, Oaf1, Oleate-activated transcription factor 1, YAF1, YAL051W |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P39720 |
| Description: | Oleate-activated transcription factor, acts alone and as a heterodimer with Pip2p; activates genes involved in beta-oxidation of fatty acids and peroxisome organization and biogenesis |
| Length: | 68 |
| Pfam Domains: | 17-52 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 MENSETHNRKRNRILFVCQACRKSKTKCDREKPECGRCVKHGLKCVYDVSKQPAPRIPSK 60 61 DAIISRLE |
| Interface Residues: | 24, 25, 26, 55, 57, 58 |
| 3D-footprint Homologues: | 1pyi_A, 6o19_A, 2er8_C, 1hwt_C, 6gys_C, 1zme_D, 1d66_B, 7uik_T, 3coq_A |
| Binding Motifs: | UP00298A_1 tykgswTAwaTCCGraatbtd |
| Binding Sites: | AAAGCCGA AAATCCGA AACGGGGG AACTCCGA AAGGGGGA AAGTCCGA AATTCCGA AATTTCCG ACTCCGAA ATCCGACG ATTTCCGA CGGAATTA CGGAGATA CGGAGTAA CGGAGTTA CGGATTTA CGGGATAA CGGGGGAA CGGGTTTA ACGGGGGA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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