Transcription Factor

Accessions: UP00430A (UniPROBE 20160601)
Names: None, PF07_0126, putative, transcription factor with AP2 domain(s)
Organisms: Plasmodium falciparum
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Description: transcription factor with AP2 domain(s), putative: putative Plasmodium falciparum transcription factor, AP2 domain
Length: 217
Pfam Domains: 52-102 AP2 domain
135-180 AP2 domain
Sequence: KRNSSDGQNKHLEPGVQKKISKKRSKVKHERNSKILDDEKKEVLNKVSQITRVGGVCFDK
NRQRWIAHWKIDGKYHKHYFPISQYGFENARERAVSCRKQAEKLFNLPEIQPRNRWNQIK
VNGTSHIKKAAKLPRCEGIGYDELSQSWVSTFVVHKKFSIEELGFYEAREKAIYCRKTFE
KVNVHDDYECLLNDRLGLRNEEKDELSDLINIDKNAL
Binding Motifs: UP00430A_1 cstagwwAwTTTCCsayttarmy
Binding Sites: AATTCTCC
AATTTCCC
AATTTCCG
AATTTTCC
AGTTTCCA
ATTTCCCC
ATTTTCCA
ATTTTCCG
GGAAACTA
AAATTTCC
AATTTCCA
ATGGAAAT
ATTTTCCC
GAATTTCC
GATTTCCA
GATTTTCC
GGAAAATA
GGAAATTA
GGAGAATA
TATGGAAA
Publications: Campbell TL, De Silva EK, Olszewski KL, Elemento O, Llinás M. Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite. PLoS Pathog : (2010). [Pubmed]
Related annotations: PaperBLAST

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