DNA Binding Site
| Accessions: | CACGCGTG (UniPROBE 20160601) |
| Organisms: | Saccharomyces cerevisiae, Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CACGCGTG |
| Type: | Heterodimer |
| Binding TFs: | UP00271A (Ankyrin repeat, KilA-N domain, Ankyrin repeats (many copies)) UP00364A (Helix-loop-helix DNA-binding domain) UP00368A (Helix-loop-helix DNA-binding domain) UP00370A (Helix-loop-helix DNA-binding domain) UP00384A (Helix-loop-helix DNA-binding domain) UP00386A (Helix-loop-helix DNA-binding domain) |
| Binding Motifs: | UP00271A_1 krgrhgACGCGTcArrwrma UP00364A_1 rkrCgCGTGTCCcwd UP00368A_1 cwrhyACGCrTGkyhwa UP00370A_1 tawgrCACGTGTchwaw UP00384A_1 wbraatataawvht UP00386A_1 rrgrCGCGTGTCCywk |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
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