DNA Binding Motif
| Accessions: | UP00384A_1 (UniPROBE 20160601) |
| Names: | HLH-2 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 14 |
| Consensus: | wbraatataawvht |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.35 0.18 0.22 0.25 w 02 0.14 0.25 0.27 0.34 b 03 0.30 0.24 0.29 0.16 r 04 0.65 0.08 0.08 0.18 a 05 0.63 0.13 0.06 0.18 a 06 0.18 0.19 0.08 0.55 t 07 0.62 0.13 0.08 0.17 a 08 0.18 0.17 0.10 0.55 t 09 0.54 0.06 0.15 0.24 a 10 0.53 0.16 0.19 0.12 a 11 0.31 0.16 0.09 0.44 w 12 0.31 0.25 0.30 0.14 v 13 0.36 0.26 0.12 0.25 h 14 0.13 0.24 0.07 0.55 t |
| Binding TFs: | UP00384A (Helix-loop-helix DNA-binding domain) |
| Binding Sites: | ACACGCGC ACACGCGT ACATGCGC ACATGCGT ACCACGCG ACGCATGG ACGCGTGG CACGCATG CACGCGTA CACGCGTG CACGTGTC CATGCGTA CCACGCGC CCATGCGC CGCATGGC CGCATGTC CGCGTGGC CGCGTGTC CGTGTGTC GCGTGTCC |
| Publications: | Grove C.A, De Masi F, Barrasa M.I, Newburger D.E, Alkema M.J, Bulyk M.L, Walhout A.J. A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138:314-27 (2009). [Pubmed] |
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