DNA Binding Site
| Accessions: | AGTATATA (UniPROBE 20160601) |
| Organisms: | Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | AGTATATA |
| Type: | Heterodimer |
| Binding TFs: | UP00584B (Homeobox domain) UP00594D (Homeobox domain) UP00595B (Homeobox domain) UP00595C (Homeobox domain) UP00599D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00607D (Zinc finger, C4 type (two domains)) UP00614C (Homeobox domain) UP00614D (Homeobox domain) UP00624C (Homeobox domain) UP00627B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627F (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627G (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Motifs: | UP00584B_1 wcywgmvaysayATGTactarms UP00594D_1 yagmhskaymwraawmsmcwaw UP00595B_2 ttmyyargTAATTAcydwtwwA UP00595C_1 TwasksyATAATTAtwGgtwkdr UP00595C_2 aakwywATaTATAyATwwhamw UP00599D_1 TamtwwTAATawATTAtbtwtm UP00607D_1 twsywmyaTATwTAsTgstwwma UP00614C_1 wwmwchkcAkTAATTAkscrtaw UP00614D_1 wwmwymkcAkTAATTAbcCrtmw UP00624C_1 cwwrymcmTasyatatrwrktws UP00627B_1 TwtTwawATAmAwATAAwwTwkG UP00627F_1 TwtTwmwATAmAwATAAwwtwkG UP00627G_1 TwtTtawATAmAwATAAwwThkG |
| Publications: | Barrera LA, Vedenko A, Kurland JV, Rogers JM, Gisselbrecht SS, Rossin EJ, Woodard J, Mariani L, Kock KH, Inukai S, Siggers T, Shokri L, Gordân R, Sahni N, Cotsapas C, Hao T, Yi S, Kellis M, Daly MJ, Vidal M, Hill DE, Bulyk ML. Survey of variation in human transcription factors reveals prevalent DNA binding changes. Science 351:1450-4 (2016). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.