DNA Binding Motif
| Accessions: | UP00103A_2 (UniPROBE 20160601) |
| Names: | Jdp2, Jun dimerization protein 2, Jundm2, Jundp2, TIF |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 16 |
| Consensus: | mdkgrTGAsTCAymam |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.33 0.28 0.22 0.17 m 02 0.25 0.13 0.27 0.34 d 03 0.10 0.14 0.27 0.49 k 04 0.21 0.12 0.49 0.18 g 05 0.63 0.03 0.33 0.01 r 06 0 0.01 0 0.98 T 07 0 0.01 0.90 0.09 G 08 0.91 0.07 0 0.01 A 09 0.01 0.44 0.53 0.01 s 10 0.01 0.01 0 0.98 T 11 0.04 0.95 0.01 0 C 12 0.99 0 0.01 0 A 13 0.02 0.52 0.03 0.43 y 14 0.33 0.41 0.10 0.16 m 15 0.32 0.22 0.24 0.23 a 16 0.31 0.29 0.19 0.21 m |
| Binding TFs: | UP00103A (bZIP transcription factor, Basic region leucine zipper) |
| Binding Sites: | GTGACTCA TGACGTAA TGACATCA AATGACGT ACGTAATC ACGTCACC ACGTCATA ACGTCATC ACGTCATG ATGACGAA ATGACGCA ATGACGTA ATGACGTC ATGACGTG ATGACTAA ATGACTCA ATGAGTCA CGTCATCA GTGACGTA GTGAGTCA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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