DNA Binding Site
| Accessions: | ATGACGCA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens, Eremothecium gossypii, Kluyveromyces lactis |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATGACGCA |
| Type: | Heterodimer |
| Binding TFs: | UP00425A (bZIP transcription factor, Basic region leucine zipper) UP00464A (bZIP transcription factor, Basic region leucine zipper, Aft1 osmotic stress response (OSM) domain) UP00428A (bZIP transcription factor, Basic region leucine zipper) UP00103A (bZIP transcription factor, Basic region leucine zipper) UP00285A (bZIP transcription factor, Basic region leucine zipper) UP00426A (bZIP transcription factor, bZIP Maf transcription factor, Jun-like transcription factor, Basic region leucine zipper) UP00516A (Fork head domain) UP00524A (Fork head domain) |
| Binding Motifs: | UP00103A_1 csgaTGACGTCAycry UP00285A_1 crwdrkrTGAsTCAymcwtmw UP00428A_1 wrdrTGAsTCAywa UP00103A_2 mdkgrTGAsTCAymam UP00425A_1 / UP00426A_1 kkwATGAsKCATmy UP00464A_1 / UP00464A_2 mhhkmmgATGACGTAwkmrrtt UP00464A_3 TGACGTCA UP00516A_1 cmmsgrgyGACGCAAAhsgwmrv UP00516A_2 mhrmsyacrktGcgyGsktkay UP00524A_1 tsctdrarysACGCAAwhrvcyy UP00524A_2 ydydgkggCGCGCGTcrtmhtms |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.