DNA Binding Site
| Accessions: | ATGACGTA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATGACGTA |
| Type: | Heterodimer |
| Binding TFs: | UP00464A (bZIP transcription factor, Basic region leucine zipper, Aft1 osmotic stress response (OSM) domain) UP00020A (bZIP transcription factor, Basic region leucine zipper) UP00084A (SAND domain) UP00103A (bZIP transcription factor, Basic region leucine zipper) UP00455A (bZIP transcription factor, Basic region leucine zipper) |
| Binding Motifs: | UP00020A_1 ackrTGACGTCAycra UP00084A_1 smkkkkRCGYmmgayrs UP00103A_1 csgaTGACGTCAycry UP00020A_2 gdaTGACGaryAwm UP00084A_2 kgrkcrACGTygtymw UP00103A_2 mdkgrTGAsTCAymam UP00455A_1 / UP00455A_2 maghygaTGACGTCAyyrtccw UP00455A_3 rTGACGTkyr UP00464A_1 / UP00464A_2 mhhkmmgATGACGTAwkmrrtt UP00464A_3 TGACGTCA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.