DNA Binding Site
| Accessions: | ACGTAATC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Arabidopsis thaliana |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ACGTAATC |
| Type: | Heterodimer |
| Binding TFs: | UP00327A (bZIP transcription factor, Transcription factor PAP1) UP00454A (bZIP transcription factor) UP00473A (bZIP transcription factor) UP00316A (bZIP transcription factor) UP00464A (bZIP transcription factor, Basic region leucine zipper, Aft1 osmotic stress response (OSM) domain) UP00103A (bZIP transcription factor, Basic region leucine zipper) UP00574A (No apical meristem (NAM) protein) |
| Binding Motifs: | UP00103A_1 csgaTGACGTCAycry UP00316A_1 sgkywgmTTAyGTaAkcrrc UP00327A_1 mkktkmTTACGTAAkmymvt UP00103A_2 mdkgrTGAsTCAymam UP00454A_1 whkktgmTTACGTAAkmycswk UP00464A_1 / UP00464A_2 mhhkmmgATGACGTAwkmrrtt UP00464A_3 TGACGTCA UP00473A_1 / UP00473A_2 gsmmamtATTACGTAAtgsmryc UP00473A_3 ATTAcTAAT UP00574A_1 gtTTACGTAAycw UP00574A_2 mwayACGCAAcyk |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.