DNA Binding Site

Accessions: AATGACGT (UniPROBE 20160601)
Organisms: Mus musculus, Saccharomyces cerevisiae
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: AATGACGT
Type: Heterodimer
Binding TFs: UP00464A (bZIP transcription factor, Basic region leucine zipper, Aft1 osmotic stress response (OSM) domain)
UP00020A (bZIP transcription factor, Basic region leucine zipper)
UP00103A (bZIP transcription factor, Basic region leucine zipper)
UP00455A (bZIP transcription factor, Basic region leucine zipper)
Binding Motifs: UP00020A_1 ackrTGACGTCAycra
UP00103A_1 csgaTGACGTCAycry
UP00020A_2 gdaTGACGaryAwm
UP00103A_2 mdkgrTGAsTCAymam
UP00455A_1 / UP00455A_2 maghygaTGACGTCAyyrtccw
UP00455A_3 rTGACGTkyr
UP00464A_1 / UP00464A_2 mhhkmmgATGACGTAwkmrrtt
UP00464A_3 TGACGTCA
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.