DNA Binding Site
| Accessions: | TGACATCA (UniPROBE 20160601), PF0009.1.13 (JASPAR 2024), PF0009.1.15 (JASPAR 2024), PF0009.1.19 (JASPAR 2024), PF0009.1.2 (JASPAR 2024), PF0009.1.5 (JASPAR 2024), MA2410.1.15 (JASPAR 2024), MA2410.1.18 (JASPAR 2024) |
| Organisms: | Mus musculus, Plasmodium falciparum, Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | TGACATCA |
| Type: | Heterodimer |
| Binding TFs: | UP00103A (bZIP transcription factor, Basic region leucine zipper) UP00440A (AP2 domain) UP00455A (bZIP transcription factor, Basic region leucine zipper) |
| Binding Motifs: | UP00103A_1 csgaTGACGTCAycry UP00103A_2 mdkgrTGAsTCAymam UP00440A_1 ChwysmdTGACATCAwrmrwag UP00455A_1 / UP00455A_2 maghygaTGACGTCAyyrtccw UP00455A_3 rTGACGTkyr PF0009.1 TGAYGTCA MA2410.1 TGACGTCA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Xie X, Lu J, Kulbokas E.J, Golub T.R, Mootha V, Lindblad-Toh K, Lander E.S, Kellis M. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434:338-45 (2005). [Pubmed] Xiang C., Miao Z., Lam E. DNA-binding properties, genomic organization and expression pattern of TGA6, a new member of the TGA family of bZIP transcription factors in Arabidopsis thaliana.. Plant Mol. Biol. 34:403-415 (1997). [Pubmed] |
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