Transcription Factor
| Accessions: | Jdp2_DBD (HumanTF 1.0), UP00103A (UniPROBE 20160601) |
| Names: | Jdp2, JDP2_MOUSE, Jun dimerization protein 2, Jundm2, Jundp2, TIF |
| Organisms: | Mus musculus |
| Libraries: | HumanTF 1.0 1, UniPROBE 20160601 2 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] 2 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P97875 |
| Description: | Jun dimerization protein 2: Mus musculus Jun dimerization protein 2 (Jundp2-pending), mRNA |
| Notes: | Ensembl ID: ENSMUSG00000034271; DNA-binding domain sequence; TF family: bZIP; Clone source: Hughes lab. |
| Length: | 95 |
| Pfam Domains: | 16-74 bZIP transcription factor 17-70 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 VKLGKRPQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAEL 60 61 KTQIEELKLERQQLILMLNRHRPTCIVRTDSVRTP |
| Interface Residues: | 24, 25, 28, 29, 31, 32, 35, 36, 39 |
| 3D-footprint Homologues: | 7x5e_F, 1skn_P, 2wt7_A, 4eot_A, 7x5e_E, 1nwq_C, 5t01_B, 5vpe_C, 5vpe_D |
| Binding Motifs: | UP00103A_1 csgaTGACGTCAycry Jdp2_DBD_1 ATGASTCAT Jdp2_DBD_2 gATGACGTCAyc UP00103A_2 mdkgrTGAsTCAymam |
| Binding Sites: | GTGACTCA TGACGTAA TGACATCA AATGACGT ACGTAATC ACGTCACC ACGTCATA ACGTCATC ACGTCATG ATGACGAA ATGACGCA ATGACGTA ATGACGTC ATGACGTG ATGACTAA ATGACTCA ATGAGTCA CGTCATCA GTGACGTA GTGAGTCA |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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