Transcription Factor
| Accessions: | UP00084A (UniPROBE 20160601) |
| Names: | 1110050A04Rik, AI256615, AI481278, glucocorticoid modulatory element binding protein 1, Glucocorticoid modulatory element-binding protein 1, GMEB-1, Gmeb1 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q9JL60 |
| Description: | glucocorticoid modulatory element binding protein 1: transcription termination factor 1, mRNA (cDNA clone MGC:69635 IMAGE:6847867), complete cds |
| Length: | 111 |
| Pfam Domains: | 19-96 SAND domain |
| Sequence: (in bold interface residues) | 1 HSIHKIEEGIDASSIEGNEDMEIAYPITCGESKAVLLWKKFVCPGINVKCVKFNDQLISP 60 61 KHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSDTCRST |
| Interface Residues: | 29, 30, 32, 84, 86 |
| 3D-footprint Homologues: | 7yoj_A, 6fl1_A |
| Binding Motifs: | UP00084A_1 smkkkkRCGYmmgayrs UP00084A_2 kgrkcrACGTygtymw |
| Binding Sites: | TGACGTAA TGACGTCA ACGTAAAA ACGTACGC ACGTACGT ATACGTAA ATGACGTA CGACGTAA CGTACGTC CTTACGTA GACGTAAA GTACGTAA GTGACGTA GTGCGTAA GTTACGTA TACGTAAA TACGTACA TGCGTCAA TTACGCAA TTACGTAA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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