DNA Binding Site
| Accessions: | TTACATAA (UniPROBE 20160601), PF0026.1.10 (JASPAR 2024), PF0026.1.11 (JASPAR 2024), PF0026.1.12 (JASPAR 2024), PF0026.1.14 (JASPAR 2024), PF0026.1.6 (JASPAR 2024), PF0026.1.7 (JASPAR 2024) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | TTACATAA |
| Type: | Heterodimer |
| Binding TFs: | UP00327A (bZIP transcription factor, Transcription factor PAP1) UP00453A (bZIP transcription factor, Transcription factor PAP1) UP00454A (bZIP transcription factor) UP00473A (bZIP transcription factor) UP00316A (bZIP transcription factor) UP00194A (Homeobox domain, Homeobox KN domain) |
| Binding Motifs: | UP00194A_1 wawrwACATGTwawwcw UP00316A_1 sgkywgmTTAyGTaAkcrrc UP00327A_1 mkktkmTTACGTAAkmymvt UP00453A_1 / UP00453A_2 ttswwwgATTAsTAATmdwavwr UP00453A_3 ATTACGTAA UP00454A_1 whkktgmTTACGTAAkmycswk UP00473A_1 / UP00473A_2 gsmmamtATTACGTAAtgsmryc UP00473A_3 ATTAcTAAT PF0026.1 TTAyrTAA |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] Xie X, Lu J, Kulbokas E.J, Golub T.R, Mootha V, Lindblad-Toh K, Lander E.S, Kellis M. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434:338-45 (2005). [Pubmed] |
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