DNA Binding Site

Accessions: CCCCGAGG (UniPROBE 20160601)
Organisms: Mus musculus, Saccharomyces cerevisiae
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: CCCCGAGG
Type: Heterodimer
Binding TFs: UP00302A
UP00005A (Transcription factor AP-2)
UP00010A (Transcription factor AP-2)
UP00028A (Transcription factor AP-2)
UP00087A (Transcription factor AP-2)
Binding Motifs: UP00005A_1 wwtsCCysrGGsraa
UP00010A_1 tyGCCybarGGCaw
UP00028A_1 wwhSCCysrGGSraw
UP00087A_1 wtysCCysrGGsraw
UP00302A_1 rkdkhgaAAwyCCGAgrrmkt
UP00005A_2 tmrCCybwGGkCak
UP00010A_2 dkwGCCksmGGCrht
UP00028A_2 wackkrAAAaAAwa
UP00087A_2 cyGCCcaagGGCwd
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.