Transcription Factor
| Accessions: | UP00087A (UniPROBE 20160601) |
| Names: | AA409384, Activating enhancer-binding protein 2 gamma, Ap-2.2, AP2-gamma, gamma, Tcfap2c, Tfap2c, transcription factor AP-2, Transcription factor AP-2 gamma |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q61312 |
| Description: | transcription factor AP-2, gamma: Mus musculus transcription factor AP-2, gamma, mRNA (cDNA clone MGC:5992 IMAGE:3592762), complete cds |
| Length: | 239 |
| Pfam Domains: | 16-223 Transcription factor AP-2 |
| Sequence: (in bold interface residues) | 1 LGLPCQKDLVGVVMNPSEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGG 60 61 VLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAE 120 121 FPSKAVADYLTRPHLGGRNEMATRKSMLLAAQQVCKEFTDLLHQDRTPNGNNRPAQVLEP 180 181 NIQNCLSHFSLITHGFGSQAICAAVSAVQNYIKEALIAIDKSYMNPGDQSPADSSKTME |
| Interface Residues: | 31, 65, 66, 108 |
| 3D-footprint Homologues: | 8j0k_B, 5l6l_D |
| Binding Motifs: | UP00087A_1 wtysCCysrGGsraw UP00087A_2 cyGCCcaagGGCwd |
| Binding Sites: | CCCCAGGC CCCCAGGG CCCCCAGG CCCCCGGG CCCCGAGG CCCCGGGC CCCCGGGG CCCGAGGG CCCGCGGG CCCGGGGC CCCTCAGG CCCTGAGG CCGCAGGC CCGGGGGC CCTAAGGC CCTCAGGC CCTCCGGC CCTCGGGC CCTGAGGC CCTGGGGC |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.