DNA Binding Site

						

			
Accessions: CCCCCGGG (UniPROBE 20160601)

			
Organisms: Mus musculus, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: CCCCCGGG
Type: Heterodimer
Binding TFs: UP00005A (Transcription factor AP-2)
UP00006A (Zinc finger, C2H2 type, Zinc-finger double-stranded RNA-binding, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00010A (Transcription factor AP-2)
UP00028A (Transcription factor AP-2)
UP00057A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00087A (Transcription factor AP-2)
UP00611I (Homeobox domain, 'Paired box' domain)
Binding Motifs: UP00005A_1 wwtsCCysrGGsraa
UP00006A_1 smCCCCCgGGGGggt
UP00010A_1 tyGCCybarGGCaw
UP00028A_1 wwhSCCysrGGSraw
UP00057A_1 bmCCCCCgGGGGggt
UP00087A_1 wtysCCysrGGsraw
UP00005A_2 tmrCCybwGGkCak
UP00006A_2 kwdCaCAGCAkGmsa
UP00010A_2 dkwGCCksmGGCrht
UP00028A_2 wackkrAAAaAAwa
UP00057A_2 ycdCvCAGCAkGara
UP00087A_2 cyGCCcaagGGCwd
UP00611I_1 sdvrtrTCtCATGaGAmrsymcy
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.