DNA Binding Site

Accessions: 3ufd_C (3D-footprint 20231221), 3ufd_G (3D-footprint 20231221), 4ivz_G (3D-footprint 20231221)
Organisms: Enterobacter sp. RFL1396
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 18
Sequence: TGTAGACTATAGTCGACA
Type: Heterodimer
Binding TFs: 3ufd_E (Helix-turn-helix, Helix-turn-helix domain)
3ufd_B (Helix-turn-helix, Helix-turn-helix domain)
4ivz_F (Helix-turn-helix, Helix-turn-helix domain)
Binding Motifs: 3ufd_AB TGTCGACTATAGTCTACA
3ufd_E TGTAGAC
4ivz_AF GTCGACAnTGTaGaC
4ivz_F TGTCGAC
Publications: Ball N.J, McGeehan J.E, Streeter S.D, Thresh S.J, Kneale G.G. The structural basis of differential DNA sequence recognition by restriction-modification controller proteins. Nucleic acids research 40:10532-42 (2012). [Pubmed]

Martin RN, McGeehan JE, Kneale G. Structural and mutagenic analysis of the RM controller protein C. Esp1396I : (PLoS). [Pubmed]

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