DNA Binding Motif

						

			
Accessions: 4ivz_F (3D-footprint 20231221)

			
Names: Regulatory protein
Organisms: Enterobacter sp. RFL1396
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: A Y37F mutant of C.Esp1396I bound to its highest affinity operator site OM
Length: 7
Consensus: TGTCGAC
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02      0      0     96      0      G
03      9     11      9     67      T
04      9     67      9     11      C
05      0      0     96      0      G
06     67      9     11      9      A
07      0     96      0      0      C
Binding TFs: 4ivz_F (Helix-turn-helix, Helix-turn-helix domain)
Binding Sites: 4ivz_G
4ivz_D
4ivz_C
4ivz_H
			
Publications: Martin RN, McGeehan JE, Kneale G. Structural and mutagenic analysis of the RM controller protein C. Esp1396I : (PLoS). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.