DNA Binding Site
| Accessions: | TTAATAAA (UniPROBE 20160601), MA2158.1.13 (JASPAR 2024), MA2158.1.18 (JASPAR 2024) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens, Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | TTAATAAA |
| Type: | Heterodimer |
| Binding TFs: | UP00012A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00188A (Homeobox domain, Homeobox KN domain) UP00294A (SRF-type transcription factor (DNA-binding and dimerisation domain)) UP00597B (Homeobox domain) UP00597D (Homeobox domain) UP00597G (Homeobox domain) UP00627B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627E (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627G (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) P20271 |
| Binding Motifs: | UP00012A_1 taaTTCAwTGAAswd UP00188A_1 sgawTTAATTAAwwwyy UP00294A_1 tkacctwtAATTawaybwsmw UP00012A_2 tvwybGTTAACaswkrr UP00597B_1 tksmrytyaATAAAAwwcdmtt UP00597D_1 tkswwyyyaATAAAAwwcmmtt UP00597G_1 wwtaaryYAATAAAAwtcwmww UP00597G_2 wrkmrayYAATAAAAwwcwmtt UP00627B_1 TwtTwawATAmAwATAAwwTwkG UP00627C_1 TwtTwawATAmAwATAAwwThkG UP00627D_1 kwtwywwCCCCCGCAyrwkyww UP00627E_1 gassrATGCGkGGGAwrdkwwa UP00627G_1 TwtTtawATAmAwATAAwwThkG MA2158.1 tTAATTAa |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Kagoshima H, Kohara Y. Co-expression of the transcription factors CEH-14 and TTX-1 regulates AFD neuron-specific genes gcy-8 and gcy-18 in C. elegans 399:325-36 (Dev). [Pubmed] |
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