DNA Binding Site

						

			
Accessions: GATTCCCA (UniPROBE 20160601), MA0056.3.11 (JASPAR 2024)

			
Organisms: Homo sapiens
Libraries: UniPROBE 20160601 1, JASPAR 2024 2
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 8
Sequence: GATTCCCA
Type: Heterodimer
Binding TFs: P28698 (Zinc finger, C2H2 type, SCAN domain, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
UP00480A (Ankyrin repeat, Ankyrin repeats (3 copies), Ankyrin repeat, Ankyrin repeats (many copies), Ankyrin repeats (many copies))
UP00482A (Ankyrin repeat, Ankyrin repeats (3 copies), Ankyrin repeat, Ankyrin repeats (many copies), Ankyrin repeats (many copies))
UP00484A (IPT/TIG domain, Beta-trefoil DNA-binding domain, LAG1, DNA binding)
UP00485A (MamL-1 domain)
P28698
Binding Motifs: UP00480A_4 / UP00484A_4 wtmccrTGGGAAcwwk
UP00480A_5 / UP00484A_5 / UP00485A_1 ksmscgTGGGAayswst
UP00482A_1 / UP00484A_10 / UP00485A_6 yyckwwhsCgTGGGAAmywytkd
MA0056.3 AATCCCCA
			
Publications: Del Bianco C, Vedenko A, Choi SH, Berger MF, Shokri L, Bulyk ML, Blacklow SC. Notch and MAML-1 complexation do not detectably alter the DNA binding specificity of the transcription factor CSL. PLoS One : (2010). [Pubmed]


Morris J. F., Hromas R., Rauscher III F. J. Characterization of the DNA-binding properties of the myeloid zinc finger protein MZF1: two independent DNA-binding domains recognize two DNA consensus sequences with a common G-rich core. Mol. Cell. Biol. 14:1786-1795 (1994). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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