Transcription Factor

Accessions: UP00482A (UniPROBE 20160601)
Names: CADASIL, CASIL, IMF2, notch 3, NOTCH3
Organisms: Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Description: notch 3: Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBP-J kappa and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptot
Length: 372
Pfam Domains: 121-169 Ankyrin repeat
152-233 Ankyrin repeats (3 copies)
167-209 Ankyrin repeats (many copies)
172-202 Ankyrin repeat
172-200 Ankyrin repeat
174-215 Ankyrin repeats (many copies)
191-246 Ankyrin repeats (many copies)
205-235 Ankyrin repeat
222-302 Ankyrin repeats (3 copies)
238-269 Ankyrin repeat
240-292 Ankyrin repeats (many copies)
243-333 Ankyrin repeats (3 copies)
262-312 Ankyrin repeats (many copies)
272-302 Ankyrin repeat
274-325 Ankyrin repeats (many copies)
276-357 Ankyrin repeats (3 copies)
306-330 Ankyrin repeat
306-335 Ankyrin repeat
Sequence: KREHSTLWFPEGFSLHKDVASGHKGRREPVGQDALGMKNMAKGESLMGEVATDWMDTECP
EAKRLKVEEPGMGAEEAVDCRQWTQHHLVAADIRVAPAMALTPPQGDADADGMDVNVRGP
DGFTPLMLASFCGGALEPMPTEEDEADDTSASIISDLICQGAQLGARTDRTGETALHLAA
RYARADAAKRLLDAGADTNAQDHSGRTPLHTAVTADAQGVFQILIRNRSTDLDARMADGS
TALILAARLAVEGMVEELIASHADVNAVDELGKSALHWAAAVNNVEATLALLKNGANKDM
QDSKEETPLFLAAREGSYEAAKLLLDHFANREITDHLDRLPRDVAQERLHQDIVRLLDQP
SGPRSPPGPHGL
Binding Motifs: UP00482A_1 yyckwwhsCgTGGGAAmywytkd
Binding Sites: CGTGTGAA
AGTTCCCA
ATGGGAAA
ATGGGAAC
ATTCCCAC
CATGGGAA
CCGTGGGA
CCTGGGAA
CGTGGGAA
CTGGGAAA
CTGGGAAC
CTTTCCCA
GATTCCCA
GGTGGGAA
GGTTCCCA
GTGGGAAA
GTGGGAAC
GTTTCCCA
TGGGAAAA
TGTGGGAA
Publications: Del Bianco C, Vedenko A, Choi SH, Berger MF, Shokri L, Bulyk ML, Blacklow SC. Notch and MAML-1 complexation do not detectably alter the DNA binding specificity of the transcription factor CSL. PLoS One : (2010). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.