Transcription Factor

Accessions: B4FDH4 (JASPAR 2024)
Names: B4FDH4_MAIZE
Organisms: Zea mays
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: B4FDH4
Length: 432
Pfam Domains: 90-150 Dof domain, zinc finger
Sequence: MGEGRAGDGLIKLFGKTIPVPETAAVGEAAKDMQQSGGSGSGTTDPKGQENNVQDSTGSP
PQQEVADTEDSSADKQQGEAGNPKEKLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHF
CKNCQRYWTAGGAMRNVPVGAGRRKSKSASATSHFLQRVRAGLPVDPLVCAAAKTNGTVL
SFGSAMSSLDLTEQMKQLKEKLVPIAGDERSVGSRTQGPSAKAEDPDRKENVTADKSARV
VQHPCMTNGVAMWPFSCAPPVPASACYGPGSIAIPFYPAAAAAAAYWGCMVPGAWSGAWP
PHSGQSETGSSITSASPAASTKSNICFTPGKHPRDRDEEGGAKGNGKVWVPKTIRIDDVD
EVARSSILSLIGIGGDKAGKDGGRGCKLARVFEQNEEAARTATPHSAAISGLPFLQGNPA
ALSRSLTFQEGS
Binding Motifs: MA1823.1 arAAAGAAAAar
MA1823.2 AAAGAAAA
Binding Sites: MA1823.2.16
MA1823.2.9
MA1823.2.17
MA1823.2.8
MA1823.2.14 / MA1823.2.5
MA1823.1.19
MA1823.2.12
MA1823.2.2
MA1823.2.20
MA1823.1.1
MA1823.1.10 / MA1823.1.13
MA1823.1.11 / MA1823.1.16
MA1823.1.12
MA1823.1.13 / MA1823.1.19
MA1823.1.14
MA1823.1.15
MA1823.1.16
MA1823.1.17
MA1823.1.18
MA1823.1.2
MA1823.1.20
MA1823.1.3
MA1823.1.4 / MA1823.1.5
MA1823.1.5 / MA1823.1.6
MA1823.1.6 / MA1823.1.7
MA1823.1.10 / MA1823.1.7
MA1823.1.11 / MA1823.1.8
MA1823.1.12 / MA1823.1.9
MA1823.2.13 / MA1823.2.19
MA1823.2.11
MA1823.2.15
MA1823.1.1
MA1823.1.14
MA1823.1.15
MA1823.1.17
MA1823.1.18
MA1823.1.20
MA1823.1.4
MA1823.1.8
MA1823.1.9
MA1823.2.1 / MA1823.2.18
MA1823.2.10
MA1823.2.3
MA1823.2.4
MA1823.2.6 / MA1823.2.7
Publications: Yanagisawa S., Schmidt R. J. Diversity and similarity among recognition sequences of Dof transcription factors.. Plant J. 17:209-214 (1999). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.