DNA Binding Motif
| Accessions: | MA1823.1 (JASPAR 2024) |
| Names: | Zm00001d027846 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | arAAAGAAAAar |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 430 159 223 175 a 02 399 157 264 167 r 03 818 46 86 37 A 04 893 17 44 33 A 05 929 6 30 22 A 06 23 24 866 74 G 07 896 29 38 24 A 08 915 11 28 33 A 09 914 27 33 13 A 10 752 53 123 59 A 11 429 154 233 171 a 12 424 130 261 172 r |
| Type: | Heterodimer |
| Binding TFs: | B4FDH4 (Dof domain, zinc finger) B4FDH4 |
| Binding Sites: | MA1823.1.19 MA1823.1.1 MA1823.1.10 / MA1823.1.13 MA1823.1.11 / MA1823.1.16 MA1823.1.12 MA1823.1.13 / MA1823.1.19 MA1823.1.14 MA1823.1.15 MA1823.1.16 MA1823.1.17 MA1823.1.18 MA1823.1.2 MA1823.1.20 MA1823.1.3 MA1823.1.4 / MA1823.1.5 MA1823.1.5 / MA1823.1.6 MA1823.1.6 / MA1823.1.7 MA1823.1.10 / MA1823.1.7 MA1823.1.11 / MA1823.1.8 MA1823.1.12 / MA1823.1.9 MA1823.1.1 MA1823.1.14 MA1823.1.15 MA1823.1.17 MA1823.1.18 MA1823.1.20 MA1823.1.4 MA1823.1.8 MA1823.1.9 |
| Publications: | Yanagisawa S., Schmidt R. J. Diversity and similarity among recognition sequences of Dof transcription factors.. Plant J. 17:209-214 (1999). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.