DNA Binding Site

						

			
Accessions: 1rzr_B (3D-footprint 20231221), 1rzr_R (3D-footprint 20231221), 3oqo_E (3D-footprint 20231221)

			
Organisms: Bacillus megaterium, Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 16
Sequence: CTGTTAGCGCTTTCAG
Type: Heterodimer
Binding TFs: 1rzr_C / 1rzr_D / 1rzr_G (Bacterial regulatory proteins, lacI family, Periplasmic binding proteins and sugar binding domain of LacI family, Periplasmic binding protein-like domain, Periplasmic binding protein domain)
3oqo_C (Bacterial regulatory proteins, lacI family, Periplasmic binding proteins and sugar binding domain of LacI family, Periplasmic binding protein-like domain, Periplasmic binding protein domain)
Binding Motifs: 1rzr_AD TGTnAGCGCTnTCA
1rzr_C CGCTnACA
1rzr_CG TGTnAGCGCTTTCA
3oqo_AC TGnraACGcnnaCA
3oqo_C cGCTttCA
			
Publications: Schumacher M.A, Allen G.S, Diel M, Seidel G, Hillen W, Brennan R.G. Structural basis for allosteric control of the transcription regulator CcpA by the phosphoprotein HPr-Ser46-P. Cell 118:731-41 (2004). [Pubmed]


Schumacher M.A, Sprehe M, Bartholomae M, Hillen W, Brennan R.G. Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators. Nucleic acids research 39:2931-42 (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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