DNA Binding Site

						

			
Accessions: MA0586.3.20 (JASPAR 2024), MA0748.3.1 (JASPAR 2024), UN0353.2.5 (JASPAR 2024), UN0353.2.6 (JASPAR 2024)

			
Organisms: Arabidopsis thaliana, Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 7
Sequence: ATGGCGA
Type: Heterodimer
Binding TFs: Q8RY95 (SBP domain)
O15391 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q8VZI9 (Alcohol dehydrogenase transcription factor Myb/SANT-like, Myb/SANT-like DNA-binding domain)
O15391
Q8RY95
Q8VZI9
Binding Motifs: MA0586.3 tCCGTAC
MA0748.3 ATGGCGG
UN0353.2 mCGGCGA
			
Publications: Liang X., Nazarenus T. J., Stone J. M. Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance.. Biochemistry 47:3645-3653 (2008). [Pubmed]


Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.